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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914806.1_cds_XP_016464774.1_57786
CDS Infomation

[gene=LOC107787685] [db_xref=GeneID:107787685] [protein=E3 ubiquitin-protein ligase At1g12760-like isoform X2] [protein_id=XP_016464774.1] [location=join(16763..17244,22012..22134,22241..22373,23353..23517,23615..23785)] [gbkey=CDS]
Sequence

ATGTTTTCAGCCAGTTCATCAAATTCACCATTACTAAGATCCAACGAAAACGATGAGTCC
TTTCACCTGCGATCACCTCGTCGACATAGCCTTCGAGAAGCAATTCGGGTATTCCAAAGA
GCCAGCAACAGAAGTGGGTTAATGATGCGTGAGCCATCTGATCAGCAAGTCAATGATAGG
CAAAGTAATTGGGCTTACTCTAAGCCCGTTGTGATTATTGACCTCCTATGGAACTTTGCA
TACATCATTGTTGCGTGTTTTGTCTTATTCTTCAGTAGAGAAGAAGACCCAGAAATGCCT
TTGAGGATTTGGATTGTTGGCTACTCTTTGCTTTGCGTGCTTCATATTGTGTGTGTCTTT
TTGGAGTATCGGAGAAGAGGATATGGGCAATCCGATGAGGCGTCGTTTGGGAGCTCTGCT
GAGGGTTCGAGTGGGTCTAGTGGTTATGTTACTTTGGCTGAATTAACCCCCGAAAGATCA
AGTAATATGGCGAAGTATATGGATTCTGCAAATACAATGTTATCATTCCTCTGGTGGATC
ATTGGATTTTATTGGGTATGTATTGGTGGGCAACGGATGGTACAAAAATCCCCTCAATTA
TACTGGCTCTGCATTGTTTTCTTGGCTTTTGATGTATTCTTTGTGGTCTTCTTAATTACG
TTGGCGTGTGCTGTTGGTCTCGGAATCTGCTGTTGTCTTCCATGTATTATTGCTGTTCTA
TATGCTGTAGCTGATCAGAAAGGAGCTGACAAAGAAGATATTGAACAACTGTCAAAGTAC
ATTTTTCGACAAAATGGCTGTAGTGATAATCGGACTGGTGAAATCCAAGGGACATTTGCT
GGATTCATGACCCAGTGTGGGACAGATACACCCATAGAGCACTCACTTTCCACAGACGAT
GCTGCATGTTCCATATGTCTCTCTACTTATGATGATGGAGAAGAACTCCGAGAACTTCCC
TGTGGTCACCATTTTCACTGTGCTTGTATTGACAAATGGCTATATATGAGTGCAACCTGT
CCCCTTTGCAAGCGCAGCATCGTTGGGGCTAGCTGTTGCAGTGAAGAAGTGTAG

Peptide Sequence

PEP ID

XP_016464774.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2 [Nicotiana tabacum]
Sequence

MFSASSSNSPLLRSNENDESFHLRSPRRHSLREAIRVFQRASNRSGLMMREPSDQQVNDR
QSNWAYSKPVVIIDLLWNFAYIIVACFVLFFSREEDPEMPLRIWIVGYSLLCVLHIVCVF
LEYRRRGYGQSDEASFGSSAEGSSGSSGYVTLAELTPERSSNMAKYMDSANTMLSFLWWI
IGFYWVCIGGQRMVQKSPQLYWLCIVFLAFDVFFVVFLITLACAVGLGICCCLPCIIAVL
YAVADQKGADKEDIEQLSKYIFRQNGCSDNRTGEIQGTFAGFMTQCGTDTPIEHSLSTDD
AACSICLSTYDDGEELRELPCGHHFHCACIDKWLYMSATCPLCKRSIVGASCCSEEV

Transcript Sequence

Gene sequence data has not been registered.